Hi cmal. Blind Internet diagnosis is not possible for an issue like this. Your best course of action would be to get a second opinion from another Dealership or an independent shop you trust.
Also, you are not providing much information. Who replaced the driver door and fender? You? The same Dealership that told you the "door harness was wrong"? When did the other problems begin? Right after the door and fender were replaced? If the Dealer installed the "wrong door harness, why aren't they making it right, etc.?
Either way this can not be blind diagnosed.
Let us know how you make out and good luck.